# Qwen235B Thinking Decode-Only Harness Run, 2026-04-28

## Goal

Run the qwen235b thinking decode-only tuning with the same harness-guided workflow used for the prefill-only test, while keeping the harness generic. The harness must use workload mode, configured SLOs, legal topology constraints, and measured trial history rather than testcase-specific throughput thresholds.

## Baseline Reference

The before-harness comparison run is `dash0-qwen235b-decode-thinking-run5-tpot40-topology`:

| Iter | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
| before harness request/s | 0.1267 | 0.2450 | infeasible | launch fail | infeasible | infeasible | infeasible | infeasible | 0.2817 | infeasible | infeasible | infeasible |

Before harness, the best feasible config appeared at iter 9 with 0.2817 request/s.

## Harness Change

The decode-only harness now defaults to `decode_tpot` when `trace.request_mode=decode_only` and a TPOT SLO is configured. This avoids treating long decode-only prompt hints as a TTFT-prefill workload.

Active decode harness families are generic:

- `tensor-parallel-size`: legal TP/DP redistribution, judged by configured SLO pass rate and request_rate_per_gpu.
- `data-parallel-size`: legal replica topology changes for decode/admission bottlenecks.
- `max-num-seqs`: concurrency adjustment from observed TPOT failures or SLO headroom.
- `max-num-batched-tokens`: decode batching adjustment after topology is stable.
- `expert-parallel`: preserve known-valid EP topology, but change EP size only with EP-specific evidence.

No qwen235b-specific threshold or testcase-specific rule was added.

## Current Run

Started on dash0, 8x H20.

- Remote spec: `.aituner/harness-qwen235b-decode-20260428/dash0_qwen235b_decode_thinking_harness_20260428.json`
- Remote store: `.aituner/harness-qwen235b-decode-20260428/dash0-qwen235b-decode-thinking-harness-20260428`
- Remote tmux: `aituner_qwen235b_decode_harness_20260428`
- Remote log: `logs/qwen235b_decode_harness_20260428.log`
- Code commit: `39aa47f`
- Verification: local and dash0 both passed `PYTHONPATH=src python3 -m unittest discover -s tests`.

The first attempt started a duplicate `trial-0001` baseline. Because the identical baseline was already measured in run5 and the decode probe can run for many minutes, that duplicate run was stopped and GPUs were freed.

The active run is now seeded from the real run5 baseline and continues from `trial-0002`:

- Remote spec: `.aituner/harness-qwen235b-decode-20260428-seeded/dash0_qwen235b_decode_thinking_harness_seeded_20260428.json`
- Remote store: `.aituner/harness-qwen235b-decode-20260428-seeded/dash0-qwen235b-decode-thinking-harness-seeded-20260428`
- Seeded `trial-0001`: 0.1267 request/s, 0.0158 request/s/GPU, pass rate 0.9868.
- `proposal-0002`: legal adjacent decode topology move from `TP4/DP2/EP8` to `TP2/DP4/EP8`; no EP-size search and no testcase threshold.
- `trial-0002`: completed, 0.3767 request/s, 0.0471 request/s/GPU, pass rate 0.9779.
- `trial-0003`: completed with no feasible point for `TP1/DP8/EP8`.
- `trial-0004`: completed with no feasible point for `max-num-seqs=160`.
- Important caveat: `trial-0004` did not actually validate `TP2/DP4/EP8 + max-num-seqs=160`. AITuner applies `config_patch` relative to the study base config, and the proposal only patched `max-num-seqs`. The actual launch therefore used the base topology `TP4/DP2/EP8 + max-num-seqs=160`, so this is not evidence that same-topology refinement around `trial-0002` is exhausted.
- `trial-0005`: corrected same-topology validation, `TP2/DP4/EP8 + max-num-seqs=160`; completed with no feasible point.

The `trial-0002` proposal matches the first useful topology direction from the earlier before-harness run, but the new harness-controlled run measured substantially better throughput for that topology.

## Result Judgment

Fig-18-style raw throughput table:

| Run | Iter 1 | Iter 2 | Iter 3 | Iter 4 | Iter 5 | Iter 6 | Iter 7 | Iter 8 | Iter 9 | Iter 10 | Iter 11 | Iter 12 |
| --- | ---: | ---: | --- | --- | --- | --- | --- | --- | ---: | --- | --- | --- |
| before harness request/s | 0.1267 | 0.2450 | infeasible | launch fail | infeasible | infeasible | infeasible | infeasible | 0.2817 | infeasible | infeasible | infeasible |
| harness request/s | 0.1267 | 0.3767 | infeasible | infeasible | infeasible | not run | not run | not run | not run | not run | not run | not run |

Per-GPU throughput table:

| Run | Iter 1 | Iter 2 | Iter 3 | Iter 4 | Iter 5 | Iter 6 | Iter 7 | Iter 8 | Iter 9 | Iter 10 | Iter 11 | Iter 12 |
| --- | ---: | ---: | --- | --- | --- | --- | --- | --- | ---: | --- | --- | --- |
| before harness req/s/GPU | 0.0158 | 0.0306 | infeasible | launch fail | infeasible | infeasible | infeasible | infeasible | 0.0352 | infeasible | infeasible | infeasible |
| harness req/s/GPU | 0.0158 | 0.0471 | infeasible | infeasible | infeasible | not run | not run | not run | not run | not run | not run | not run |

Decision: the harness accelerated convergence on qwen235b decode-only, but this is not a proof of global optimality after one proposal. The before-harness run first reached its best observed throughput at iter 9 with 0.2817 request/s. The harness run exceeded that value at iter 2 with 0.3767 request/s, a 1.34x improvement over the before-harness 12-iter best and a 2.97x improvement over the baseline config.

The harness did not stop cleanly after finding the strong incumbent. It spent one additional trial on `TP1/DP8/EP8`, which found no feasible point. The next proposal intended same-topology runtime validation, but omitted the incumbent topology fields, so the materialized trial validated the base topology instead. This issue was corrected with `trial-0005`.

Important interpretation: `trial-0002` should be called the current best observed config, not a global optimum proof. The harness got there quickly because the decode-only harness biases the first proposal toward the most relevant adjacent topology redistribution, `TP4/DP2/EP8 -> TP2/DP4/EP8`, instead of spending trials on prefill-oriented runtime knobs. Later validation now supports local optimality against the tested adjacent topology and the tested same-topology `max-num-seqs=160` runtime refinement.

Follow-up implementation after this result:

- `strong_incumbent.guard_active` no longer directly contributes to `should_stop_if_no_harness_can_justify_a_new_adjacent_probe`.
- A strong incumbent now means "enter validation phase": run adjacent topology or same-topology runtime probes that could falsify the incumbent.
- The proposal rules now explicitly say not to stop solely because a strong incumbent appeared.
- Proposal parsing now accepts structured `observation`/`diagnosis` by converting them to text, so a usable validation proposal is not dropped only because the LLM used an object instead of a string.

After the implementation fix, the previously rejected `proposal-0004` was resumed as a validation trial:

- `trial-0004`: intended same-topology validation with `max-num-seqs=160`, but actually ran on base topology because the proposal omitted `TP2/DP4/EP8`.
- Remote tmux: `aituner_qwen235b_decode_harness_validate_20260428`.
- Result: completed with no feasible point. This is useful negative evidence for the base topology plus `max-num-seqs=160`, but not for the `trial-0002` incumbent topology.

A second validation trial was then launched with the full incumbent topology in the patch:

- `trial-0005` config: `TP2/DP4/EP8 + max-num-seqs=160`.
- Search range: low `0.017028808593`, high `0.125`, tolerance `0.001`, max probes `6`.
- Result: completed with no feasible point; `trial-0002` remained the best trial.
- Probe outcomes:

| Probe sampling_u | Request/s | Pass rate | Feasible | Early-stop reason |
| ---: | ---: | ---: | --- | --- |
| 0.0710144 | 1.7800 | 0.2818 | no | `slo_pass_rate_unrecoverable` |
| 0.0440216 | 1.0900 | 0.1789 | no | `slo_pass_rate_unrecoverable` |
| 0.0305252 | 0.7050 | 0.3002 | no | `slo_pass_rate_unrecoverable` |
| 0.0237770 | 0.5417 | 0.4092 | no | `slo_pass_rate_unrecoverable` |
| 0.0204029 | 0.4533 | 0.4890 | no | `slo_pass_rate_unrecoverable` |
| 0.0187159 | 0.4117 | 0.5466 | no | `slo_pass_rate_unrecoverable` |

This directly answers the one-iter-to-best concern for this refinement: the harness did not stop after `trial-0002`; it ran a corrected same-topology validation, and every tested point above the incumbent search floor failed the 95% TPOT SLO. Therefore `max-num-seqs=160` does not falsify `trial-0002` as the current best.

## Follow-up Fix

The seeded prompt exposed a generic diagnosis issue: if the best feasible probe had no latency failures, the harness could miss the prior infeasible probe that showed the real bottleneck at higher load. The harness now scans the probe sequence backward and uses the nearest non-trivial bottleneck before falling back to the best feasible probe. This keeps decode-only runs focused on `decode_tpot` after a feasible low-load point, without adding testcase thresholds.

A second generic diagnosis bug was fixed: non-SLO bookkeeping counts such as `probe_elapsed_s>...` no longer collapse to `ttft_prefill` when TTFT/TPOT/request failure counts are all zero.

## Follow-up Fix, 2026-04-30

The base-relative patch issue is now guarded in code, not only in the LLM prompt. When `StudyStore.materialize_trial` sees a runtime/env-only proposal after a non-base incumbent has been found, it inherits the incumbent topology patch into the trial spec unless the proposal explicitly provides a topology. This keeps same-topology runtime validation on the actual incumbent while preserving the ability to test the base topology by stating it explicitly.

Local verification at that commit: `PYTHONPATH=src python3 -m unittest discover -s tests` passed. The current repository suite has since grown; rerun the command rather than relying on this historical test count.

## Current Harness Judgment

For qwen235b decode-only, the harness still accelerates convergence: before harness, the best observed 12-iter result appeared at iter 9 with 0.2817 request/s; with harness, iter 2 reached 0.3767 request/s and later validation did not find a better adjacent or same-topology runtime point.

The remaining optimization is validation cost, not convergence quality. `trial-0005` took a long time because early-stopped decode-only probes still had to wait for in-flight long-output requests unless the engine is restarted after early stop. As of 2026-05-02, decode-only studies default to `trace.restart_engine_after_early_stop=true` when the field is not explicitly set, and the qwen235b decode examples set it explicitly.

See `docs/qwen235b-thinking-decode/one-shot-mechanism-ablation-20260502.md` for the detailed mechanism explanation and harness ablation.
